NetworkAnalyzer is a flash-based online software environment which enables biologists to easily visualize and analyze high-throughput experimental data in the context of complex protein network hypotheses, peform quantitative simulations, collaborate with colleagues, and publish experiments and analysis.
1 network biology2 visualization & analysis3 collaboration & open access
NetworkAnalyzer Features
Hypothesis-Driven Data Analysis Describe prior knowledge about biological systems as network diagrams. Annotate network components with supporting evidence.
Automatic Diagram Layout Create graphically stunning network diagrams quickly and easily using our automatic layout algorithm.
Experimental Time Course Animation Animate network diagrams with high dimensional biological data such as flow cytometry. Link experimental measurements to network components and color network components by their experimentally observed activity.
CytoBank Integration Easily link networks with CytoBank flow cytometry data.
Computational Simulation Generate MATLAB code for Boolean network simulation.
Export stunning graphics Export to gif, jpg, pdf, png svg, and swf formats.
Export to common exchange formats BioPax, CellML, and SBML.
Collaborate with Colleagues Network manager allows you to manaage user access to networks. Networks are stored on our server and accessible from any computer.
Open Access Network manager allows you to make networks publicly available.
What's New?
NetworkAnalyzer is under active development. Check back as new features are added.
Software Requirements
Web-browser
Adobe Flash version 10.0 or higher
As of 4/1/2009, NetworkAnalyzer is live! Help us test and improve the new software. Please send comments and suggestions to .